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People

Patrick Yizhi Cai : Professor

Patrick Yizhi Cai


Professor


yizhi.cai@manchester.ac.uk

Dr. Cai’s CV | Learn more about the lab’s research

Nicole Lai : Manager

Nicole Lai


Manager


nicole.lai@manchester.ac.uk

Nicole completed her BSc in Biotechnology at The Hong Kong University of Science and Technology. Following her graduation, she has been working at various research institutes in Hong Kong and Edinburgh, providing technical support for biochemical experiments. She joined Cai’s Lab in 2024. In her leisure time, she enjoys watching movies and Japanese animation.

Katie Lee : Technician

Katie Lee


Technician


katie.lee-2@manchester.ac.uk

Katie earned her BSc (Hons) in Human Biology and Infectious Diseases with professional studies from the University of Salford, which included a placement year focused on researching phytomedicinal compounds and their chemotherapeutic potential against certain childhood cancers. After graduating, she worked briefly as a diagnostic analyst at a food testing company before joining the Cai lab in 2024. She hopes to provide technical support to the lab while gaining practical knowledge and skills in preparation for her PhD. Outside of her lab work, Katie enjoys cooking, watching movies, and spending time with friends and family.

Kewin Gombeau : Postdoctoral research associate

Kewin Gombeau


Postdoctoral research associate


kewin.gombeau@manchester.ac.uk

Kewin joined the group of Professor Patrick Cai in 2019 as a postdoctoral research associate. He performed his PhD at the University Aix-Marseille, France, under the supervision of Prof. Jean-Paul Bourdineaud and Dr. Christelle Adam-Guillermin, aiming at integrating the epigenetic response in the field of radioecotoxicology. He then joined in 2017 the research team lead by Dr. Jean-Paul di Rago, France, to work on the nuclear relocation of mitochondrial genes in the budding yeast Saccharomyces cerevisiae.
His current research aims at implementing a fully synthetic, size-reduced and functional mitochondrial genome in S. cerevisiae by removing the presumably non-essential inter- and intragenic sequences, representing more than 80% of the mitochondrial genome size. Kewin truly believes that mitochondria play a central role in eukaryotic cell’s adaptive capabilities and evolution.
In his spare time, Kewin enjoys learning about psychology, playing guitar and cooking.

Raymond Wan : Postdoctoral research associate

Raymond Wan


Postdoctoral research associate


raymond.wan@manchester.ac.uk

Ray obtained his BSc from the University of British Columbia (1997) and PhD from the University of Melbourne (2004), both in computer science.  His PhD dissertation was on text compression and information retrieval.  Since then, he has worked as a researcher in bioinformatics in Japan and Hong Kong on various next generation sequencing and genotyping projects.  He joined the Cai lab in 2022 as a computational biologist.  His personal interests include computer games, the piano, and almost anything related to Japan.

Mark McCullough : Postdoctoral research associate

Mark McCullough


Postdoctoral research associate


mark.mccullough@manchester.ac.uk

Mark joined the Cai Lab in 2022 as a computational post-doc. He completed his PhD at Queen’s University Belfast, under the supervision of Professor Paulo Prodohl, which entailed a Population Genomics approach to managing European oyster populations. Mark’s interests are in computational tools to assist the design-build-test-learn cycles of synthetic biology and genomics projects. Mark enjoys cycling, reading and watching science-fiction.

Leandro Vieira dos Santos : Postdoctoral research associate

Leandro Vieira dos Santos


Postdoctoral research associate


leandro.vieiradossantos@manchester.ac.uk

Leandro holds his BSc in Microbiology from the Federal University of Viçosa, and PhD in Genetics and Molecular Biology from the State University of Campinas. His PhD was about metabolic engineering and adaptive evolution of yeasts to produce biofuels from renewable sources. Since then, he has worked as researcher in the area of synthetic biology and metabolic engineering in industry and research institutes, designing yeasts to produce biofuels and value-added biochemicals. He joined the Cai lab at the end of 2022 applying evolution to understand molecular mechanisms of speciation. Personal interests include travelling, reading and learning about economy.

 

Ravishankar Babu : Postdoctoral research associate

Ravishankar Babu


Postdoctoral research associate


ravishankar.babu@manchester.ac.uk

Ravi joined the group of Professor Patrick Cai in 2023 as a postdoctoral research associate. He finished his PhD from University of Aberdeen, UK under the supervision of Professor Ian Stansfield, working on transcriptional regulation of tRNAs and translational elongation factor EEF2A in Saccharomyces Cerevisiae. He then joined the lab of Dr. Yulia Yuzenkova in 2021 as a postdoctoral research associate at Centre for Bacterial Cell Biology, Newcastle University where he worked on NAD+ capped RNA in E.coli and its role in regulating transcriptional and translational efficiency. His current research aims at engineering of human artificial chromosomes and application of tRNA neochromosomes in regulating translational efficiency. In his free time, he likes capturing moments and places through photography.

Josh James : Postdoctoral research associate

Josh James


Postdoctoral research associate


joshua.james-2@manchester.ac.uk

Josh joined the Cai group in 2019 as a PhD student, where he combined DNA synthesis, automation, recombinases, and CRISPR-Cas engineering to develop platforms for dissecting complex features of the human genome. His work was conducted in collaboration with Dr Wei Leong Chew at the Genome Institute of Singapore, where he spent the final two years of his doctoral studies (2021-2023). Upon completion of his PhD, Josh returned to the Cai Group as a PDRA. His current research continues to focus on translating advances in microbial synthetic genomics to larger, more complex eukaryotic genomes. Josh holds a MSci from the University of Bristol, working with Prof. Thomas Gorochowski and outside of the lab enjoys cooking, travel, and SCUBA diving.

Ryan Cochrane : Postdoctoral research associate

Ryan Cochrane


Postdoctoral research associate


ryan.cochrane@manchester.ac.uk

Ryan joined the lab as a post-doctoral research associate in 2024. He earned his Bachelor’s degree in Medical Sciences with an honors specialization in Interdisciplinary Medical Sciences from the University of Western Ontario in 2017. During his undergraduate years, he worked in an entomology lab, studying the evolution of moths, but also worked in a pizzeria, as a supplement salesman, and in a General Motors car factory. He then pursued a PhD in the Biochemistry department, focusing on the development of genetic tools for microbes, algae, and yeasts. During his PhD, he published papers concerning mitochondrial genome engineering, microbial chassis, improved DNA delivery methods and development of antifungals. For this work he was awarded the prestigious Alexander Graham Bell Canadian Graduate Scholarship and received his doctorate in 2023.

Ryan’s current research interests involve utilising synthetic genomics to create bottom-up platforms for high-throughput genome engineering to address important global challenges, such as creating future drugs to combat antimicrobial resistance.

Outside of the lab, Ryan is a retired professional gamer. He enjoys weightlifting, backpacking, and reading a wide range of books — from “Autobiography of a Yogi” to “The History of Western Philosophy” to “Musashi” — and exploring forgotten scientific manuscripts and textbooks.

Sergio Gutierrez : Postdoctoral research associate

Sergio Gutierrez


Postdoctoral research associate


sergio.gutierrezzapata@manchester.ac.uk

Sergio joined Professor Patrick Cai’s group in October 2024, fresh from
completing his PhD at KAUST. His postdoctoral work focuses on expanding
the genetic code to develop biosynthetic pathways for non-canonical amino
acids and create customized yeast strains for efficient protein production.

Bringing valuable expertise in algae genetic engineering, Sergio explores
the design of synthetic chromosomes for these photosynthetic organisms.
This research aims to enhance yields of native products and enable complex
biochemical pathways for novel metabolite production from sustainable
inputs. During his PhD, Sergio showcased this potential by engineering
Chlamydomonas reinhardtii to produce specialty terpenes, demonstrating
microalgae’s capability as sustainable cell factories.

Sergio’s journey in science began in Colombia with a bachelor’s in
microbiology. He then earned a master’s in environmental science and
engineering from KAUST, studying the interplay between metals and
antibiotic resistance in water systems. This diverse background, spanning
microbiology, environmental science, and bioengineering, enables Sergio to
approach synthetic biology challenges from multiple angles.

When not in the lab, Sergio enjoys traveling, photography, and weightlifting.
He also has a soft spot for street cats and dogs, often volunteering his time
to care for them.

Ana Luiza Queiroz : Postdoctoral research associate

Ana Luiza Queiroz


Postdoctoral research associate


analuiza.lemosqueiroz@manchester.ac.uk

Ana joined the lab as a post-doctoral research associate in 2024. She earned her bachelor’s degree in biological sciences from the Federal University of Minas Gerais (Brazil) and her MSc and PhD in genetics from the same institution, focusing on wildlife genetics and forensic genetics. As part of her PhD, she spent a year in the lab of Prof. George Church at Harvard University. Upon completing her PhD, Ana returned to the Church Lab as a postdoctoral research fellow to work primarily on genome editing and DNA repair pathways.
In her free time, she enjoys traveling, making art, and spending time with animals and plants.

James Sanders : PhD student

James Sanders


PhD student


james.sanders-3@postgrad.manchester.ac.uk

James joined the Cai lab in 2021 as a PhD student with a focus on expanding the genetic code of synthetic yeast. This work aims to leverage the unique design features of Sc2.0 to engineer new strains of yeast that are able to efficiently use amino acids not found in nature. Before joining the lab, James graduated with a BSc (Hons) in Genetics from the University of Glasgow followed by an MRes in Synthetic Biology from the University College London.

Eloise O’Connor : PhD student

Eloise O’Connor


PhD student


eloise.oconnor@postgrad.manchester.ac.uk

Eloise graduated with a BSc Hons in Biochemistry from Imperial College London in 2019. She joined the Cai lab group in 2021 working in conjunction with Prof Jason Micklefield. Her project is on synthetic biology approaches for re-assembling biosynthetic pathways in heterologous host strains and biosensing technologies. Eloise is funded by the EPSRC Centre for Doctoral Training in BioDesign Engineering. Outside of the lab Eloise enjoys art, fitness and bouldering.

Gabrielle David : PhD student

Gabrielle David


PhD student


gabrielle.david@postgrad.manchester.ac.uk

After graduating with a Biology MSci from the University of Bristol, Gabrielle joined the Cai Lab as a PhD student in 2022. The aim of her project is to develop recording systems within yeast, utilising the vast data storage potential of DNA as a medium on which to write a history of encountered signals. Such systems may be utilised to continuously monitor events and transient signals in a range of environments, for example pollution in rivers and disease markers in the gut. In her spare time, Gabrielle loves sewing, baking, singing and working on her family farm with her collies.

Smruti Sudha Biswal : PhD student

Smruti Sudha Biswal


PhD student


smruti.biswal@postgrad.manchester.ac.uk

Smruti joined the Cai Lab in 2023 after completing her Integrated Master of Science in Life Science from the National Institute of Technology, Rourkela, India. She is enrolled in the EPSRC-funded CDT BioDesign Engineering PhD program. As a part of the program, she completed her Mres in Systems and Synthetic Biology from Imperial College London. Her project is based on developing technologies for mammalian synthetic biology of engineering disease-based genomic loci that can be used for diagnostic and therapeutic purposes. When not in the lab, she enjoys rummaging through the pages of a thriller novel, cooking and most likely munching on desserts!

Maisie Czernuszka : PhD student

Maisie Czernuszka


PhD student


maisie.czernuszka@student.manchester.ac.uk

Maisie recently joined the Cai lab as a PhD student after graduating with a Biology MSci from the University of Manchester in July 2023. In collaboration with Prof. Michael Brockhurst, her work aims to engineer bacteriophages within yeast. Maisie’s primary focus is the development and implementation of a diverse range of biocontainment and safeguarding strategies, with the ultimate goal of enhancing phage therapeutics and offering an innovative alternative to traditional antibiotics. Outside of the lab, Maisie enjoys playing volleyball, reading, video games, and good food.

Zi Wang : PhD student

Zi Wang


PhD student


zi.wang-10@postgrad.manchester.ac.uk

Zi graduated with a BSc in Bioinformatics from the Chinese University of Hong Kong, Shenzhen in July 2024. He then joined the Cai Lab as a PhD student through the A*STAR PhD Programme, collaborating with Dr. Wei Leong Chew at the Genome Institute of Singapore. His research focuses on engineering non-coding RNAs in eukaryotic genomes using synthetic genomic approaches. In his free time, Zi enjoys birdwatching, visiting museums, building with LEGO, and watching football.

Warren Ho : PhD student

Warren Ho


PhD student


warren.ho@postgrad.manchester.ac.uk

Warren joined the Cai Lab as a PhD student in 2024. His research focuses on engineering modular and minimal synthetic genomes in yeast as part of the wider Sc3.0 project. Prior to joining the lab, Warren studied at Imperial College London, where he obtained a BSc Hons in Biochemistry and MRes in Systems and Synthetic Biology, working on a variety of projects including gene editing, gene drives, and synthetic cells. Outside of the lab, Warren enjoys reading, cooking, good food, and video games.

Drew Thornley : PhD student

Drew Thornley


PhD student


drew.thornley@postgrad.manchester.ac.uk

Drew joined the Cai lab as a PhD student after graduating with a Cell Biology MSci from the University of Manchester in July 2024. His work focuses on engineering optimal lysis systems for synthetic bacteriophages, In collaboration with Dr. Claudia Igler and Prof. Michael Brockhurst. Drew’s research aims to explore the fundamental killing mechanisms employed by the natural viruses of bacteria, with the goal of enhancing synthetic phage therapeutics. Outside of the lab, Drew spends his time fencing, writing, painting, and cooking.

Alumni

TitleGiven nameFamily nameDatesPosition
ElliePayneJune 2021 – Aug 2024Lab manager
WenjieZhaiFeb 2024 – Sept 2024MSc student
Dr.AlbaBalleriniFeb 2019 – July 2024MSci (Erasmus) student, PhD student, Postdoc
Dr.StefanHoffmannFeb 2019 – May 2024Postdoc
Dr.ReemSwidahMar 2018 – May 2024Postdoc
MiriamMontserrat Vega-GordilloJan 2021 – Apr 2024PhD student
MustafaKaplanJune 2023 – Sept 2023MSc student
MuyaoMaJune 2023 – Sept 2023MSc student
MartinHolubJune 2023 – Sept 2023Visiting PGDR
SanmukhShivdekarJune 2023 – Sept 2023MSc student
MartynaGrazinyteOct 2022 – June 2023Undergraduate student
AustinSempleOct 2022 – June 2023Undergraduate student
MaxFreedmanSept 2022 – May 2023MSc student
XiaoranDing2022Master (MSc) student
PerrineDalby2022Master student
MarcoMonti2022PhD student
Dr.YingyingLi2021Postdoc
Elisa BarrowMolina2021Master student
DavidLeeming2021Master student
AlexAtkinson2020Master student
Dr.DanielSchindler2020Postdoc
JamieAuxillos2020PhD student
KatarinaJonsson2019PhD student
FrancescoRagazzini2019Master student
SallyJonesSep 2019Research technician
Ivy YunjiaZhangAug 2019Visiting student, Chinese University of Hong Kong
Dr.Jason ShijianLiuAug 2019Visiting Academic, Fujian University of Technology
Jun YangOngJul 2019Undergraduate student
Dr.EvaGarcia-RuizJan 2019Postdoc
Chantal YueShen2018PhD student
PaulinaKanigowska2018PhD student
ShuangyingJiang2018Visiting PhD student
AileenGreigDec 2017Technician
Dr.AndreaMartellaDec 2017Postdoc
Dr.DariuszAbramczykDec 2017Postdoc
EmilyScherSep 2013 – Dec 2017PhD student
Nahuel ManzanaroMorenoDec 2017PhD student
Olivia WeiLiuDec 2017PhD student
RoyWalkerDec 2017PhD student
UteKoeberDec 2017PhD student
AitorBledaMay 2016 – Nov 2016Software Engineer
AnaisMoisyNov 2015 – Nov 2016Designer, Design Informatics
Sarah YijingZhengOct 2014 – Nov 2016Automation Engineer
Dr.ValentinZulkowerJun 2015- Nov 2016Software Developer
FabianSchneiderMar 2016 – Sep 2016Visiting PhD student, University of Munich
AlbaUbideOct 2013 – Sep 2016Lab manager
TianyiLiJul 2015 – Aug 2015Visiting graduate student, Tsinghua University
LoisOgunlanaJun 2015 – Aug 2015Undergraduate student in Biotechnology, University of Edinburgh
HugoVilanuevaSep 2013 – Sep 2014Honors undergraduate student in Biological Sciences, University of Edinburgh
QiFengApr 2014 – Aug 2014Visiting master student from Tianjin University
ClaireChungJun 2014 – Aug 2014Visiting undergraduate from Chinese University of Hong Kong
Jackie YunWangApr 2013 – Jun 2014Visiting scholar from BGI